PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444896
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 89aa    MW: 10179.2 Da    PI: 9.6846
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444896genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.1e-114684244
               HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS
        HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44
               r +h+  E+rRR++iN++++ Lr l+P +    ++K + a+ L
  678444896 46 RSKHSVTEQRRRSKINERYQILRGLIPRS----DQKRDTASFL 84
               899*************************8....5666666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.9984489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.01E-104485IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-124486IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.88E-64684No hitNo description
PfamPF000101.2E-84684IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MKAGKNHLEE DEDVYEEFGA NNDASPSKNT NLSKANGRSD KANVTRSKHS VTEQRRRSKI  60
NERYQILRGL IPRSDQKRDT ASFLLEVQC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006348642.15e-31PREDICTED: transcription factor BIM2-like isoform X1
SwissprotQ9CAA41e-24BIM2_ARATH; Transcription factor BIM2
TrEMBLM1BQJ56e-31M1BQJ5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000505722e-30(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44262337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-26BES1-interacting Myc-like protein 2